
Project folder structure
If your organization has a defined folder structure on how to manage folders and files, use that structure, but if you are given a free range, I highly recommend coming up with a folder structure that will help you keep files organized. In the past, most of everything was in the shapefile format, so you would typically organize by the theme of the data. Today, ArcGIS Pro will automatically create a geodatabase file when you create a new project, giving you a place to store your project data. I will usually create another geodatabase file to be my scratch area and leave the original geodatabase file as my final project data.
Whenever I receive data from someplace, I start a folder called original and create a folder with the name of the source and make the files read-only. This has saved me a few times when I received or found data, made a change to it and couldn't revert. Now I don't have to remember where I got the data or find the person who sent it to me originally. I usually create folders for each type of file I receive, for example, KML, LYRX, SHP, raster, and so on.
If you feel comfortable with a folder structure already, by all means, use it; just keep it consistent! Consistency is key when organizing things.